Hardware:

  • IBM p630 rack mountable server
  • IBM Blade Server
  • IBM x-235, 305 servers
  • Tivoli Server Manager
  • LTO Tape Back-up facilities
  • Optical Network connection
  • Several PCs
  • T10/100 and gigabit ethernet connections
  • SAN disks
  • CISCO PIX5E firewall

    Software:

  • Operating System: AIX, Windows, Linux (RH and Fedora)
  • Languages: C, C++, PERL, PHP, XML, ForTRAN, Java
  • Cheminformatics : Schrodinger Suite, Sybyl Suite (Tripos), ChemLIMS (in-house developed)
  • Database: MySQL
  • Genomics : MAS 5.0, Bioconductor, GEMAT (in-house developed)
  • Proteomics : PDQuest, WorksBase, ProteinLynx, MassLynx, PWIMS (in-house developed)
  • Statistics: SPSS, R
  • Sequence search, analysis & motifs: BLAST, CLUSTALW, PCPMer (Developed at UTMB), GIBBS, MEME
  • Modeling: MPACK (Developed at UTMB)
  • Webserver: Apache
  • Sequence Database: SWISSPROT, GenBank NR
  • Structure Database: PDB
  • Pathways: Ingenuity Analysis, KEGG, BPG (in-house developed)
  • Phylogenetic: Phylip
  • Tool kits & Packages: NCBI toolkit, EMBOSS, BioPERL

 
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